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1. g2gtools g2gtools Public

   Personal diploid genome creation and coordinate conversion

   Python 24 10

2. alntools alntools Public

   Preprocess bam file into a compressed alignment incidence matrix (equivalence class)

   Python 2 1

3. kallisto-align kallisto-align Public

   Export kallisto pseudo-alignments in a sparse binary matrix format

   C++ 5 2

4. emase-zero emase-zero Public

   C++ Implementation of EMASE

   C++ 6 2

5. emase emase Public

   Expectation-Maximization algorithm for Allele-Specific Expression

   Python 21 13

6. gbrs gbrs Public

   Genotype-free genome reconstruction and ASE quantification

   Python 8 3