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@YCSGP

YCSGP

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  1. YCSGP.github.io YCSGP.github.io Public

    HTML 2 2

  2. MuSe-GNN MuSe-GNN Public

    Forked from HelloWorldLTY/MuSe-GNN

    [NeurIPS 2023] Official codes of "MuSe-GNN: Learning Unified Gene Representation From Multimodal Biological Graph Data"

    Python

  3. JointPRS JointPRS Public

    Forked from LeqiXu/JointPRS

    Python

  4. Geneverse Geneverse Public

    Forked from HelloWorldLTY/Geneverse

    [EMNLP 2024] This is the official code repo for the paper: Geneverse: A collection of Open-source Multimodal Large Language Models for Genomic and Proteomic Research.

    Python

  5. SDPRX SDPRX Public

    Forked from eldronzhou/SDPRX

    A statistical method for cross-population prediction of complex traits

    Python

  6. SDPR SDPR Public

    Forked from eldronzhou/SDPR

    A fast and robust Bayesian nonparametric method for prediction of complex traits using GWAS summary statistics

    C

Repositories

Showing 10 of 52 repositories
  • YCSGP.github.io Public
    HTML 2 MIT 2 0 0 Updated Mar 11, 2025
  • Pathway-Analysis-using-Random-Forest Public

    An R code for pathway-based classification and regression using Random Forests.

    0 0 0 0 Updated Mar 3, 2025
  • LORS Public

    A Low-Rank representation and Sparse regression for eQTL mapping. This algorithm accounts for confounding factors such as unobserved covariates, experimental artifacts, and unknown environmental perturbations.

    MATLAB 0 0 0 0 Updated Mar 3, 2025
  • GWAS-with-MRF-pathway Public

    This is a program to implement the Markov Random Field (MRF) method to incorporate pathway topology for genome wide association studies.

    R 0 0 0 0 Updated Mar 3, 2025
  • viRandomForests Public

    Variable importance-weighted Random Forests (viRandomForests) is an R package, which samples features according to their variable importance scores, and then selects the best split from the randomly selected features, to improved prediction accuracy in the presence of weak signals and large noises.

    0 0 0 0 Updated Mar 2, 2025
  • GWAS.PC Public

    GWAS.PC (GWAS Power Calculation) is an R package that does power analysis in genome wide association studies. In particular, genotyping error is considered in power calculation.

    R 0 0 0 0 Updated Mar 2, 2025
  • gbr Public

    This is an R package implementing a post-GWAS prioritization algorithm, which incorporates the rewiring information of co-expression network to prioritize GWAS signals.

    R 0 0 0 0 Updated Mar 2, 2025
  • COSINE Public Forked from cran/COSINE

    ❗ This is a read-only mirror of the CRAN R package repository. COSINE — COndition SpecIfic sub-NEtwork

    R 0 2 0 0 Updated Mar 2, 2025
  • UTMOST Public Forked from Joker-Jerome/UTMOST

    UTMOST (unified test for molecular signatures) is a method for cross-tissue gene expression imputation for transcriptome-wide association analyses.

    Python 0 19 0 0 Updated Mar 2, 2025
  • GenomeAnnotation Public
    0 0 0 0 Updated Mar 1, 2025
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